Stem-loop cas-MIR168

Accession

MI0037196

Description

Camelina sativa cas-MIR168 precursor miRNA

Literature search

1 open access papers mention cas-MIR168
(1 sentences)

Sequence

cucggauucgcuuggugcagguugggaacugauuggcugacaccgacuuuuguuuugucgucaugguugguuugucagcuCCCGCCUUGCAUCAACUGAAUcggag
(((.((((((.((((((((((.(((((.(((((.(((((((..((((.........)))).....))))))).))))).))))).)))))))))).)))))).)))

Structure

   g      c          u     a     u       ---ac    uuu 
cuc gauucg uuggugcagg uggga cugau ggcugac     cgac   u
||| |||||| |||||||||| ||||| ||||| |||||||     ||||   g
gag cUAAGU AACUACGUUC GCCCu gacug uugguug     gcug   u
   g      C          C     c     u       guacu    uuu 

Annotation confidence Not enough data

Genome context

chr18: 2858964-2859069 [+]

Mature cas-miR168

• Accession: MIMAT0045309
• Description: Camelina sativa cas-miR168 mature miRNA
• Sequence: 81 - CCCGCCUUGCAUCAACUGAAU - 101
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25826400
   Identification of microRNAs and transcript targets in Camelina sativa by deep sequencing and computational methods
   Poudel S, Aryal N, Lu C
   PLoS One (2015) 10:e0121542