Stem-loop cas-MIR158a

Accession

MI0037177

Description

Camelina sativa cas-MIR158a precursor miRNA

Literature search

1 open access papers mention cas-MIR158a
(1 sentences)

Sequence

aucuCUGUGCUUCUUUGUCUACAAUuuuggaaaaagugaugacgccaucgcucuuucccaaauguagacaaagcaauaccgugau
(((.(.(((...(((((((((((.(((.(((((.(((((((....))))))).))))).))))))))))))))...))).).)))

Structure

   u U   CUU           A   u     a       a 
auc C GUG   CUUUGUCUACA Uuu ggaaa agugaug c
||| | |||   ||||||||||| ||| ||||| |||||||  
uag g cau   gaaacagaugu aaa ccuuu ucgcuac g
   u c   aac           -   c     c       c 

Annotation confidence Not enough data

Genome context

chr1: 4255868-4255952 [-]

Mature cas-miR158a

• Accession: MIMAT0045286
• Description: Camelina sativa cas-miR158a mature miRNA
• Sequence: 5 - CUGUGCUUCUUUGUCUACAAU - 25
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25826400
   Identification of microRNAs and transcript targets in Camelina sativa by deep sequencing and computational methods
   Poudel S, Aryal N, Lu C
   PLoS One (2015) 10:e0121542