Stem-loop cas-MIR156j

Accession

MI0037171

Description

Camelina sativa cas-MIR156j precursor miRNA

Literature search

1 open access papers mention cas-MIR156j
(4 sentences)

Sequence

uUGACAGAAGAGAGAGAGCACagcuugagucugugcuauuguuguucaucaucucuggacauguuau
.(((((....((((((((.(((((...(((....)))...))))).).)).))))).....))))).

Structure

u     -GAAG     -  - C     uug   c 
 UGACA     AGAGA GA G ACagc   agu u
 |||||     ||||| || | |||||   |||  
 auugu     ucucu cu c uguug   ucg g
u     acagg     a  a u     uua   u 

Annotation confidence Not enough data

Genome context

chr6: 18107442-18107508 [+]

Mature cas-miR156j

• Accession: MIMAT0045279
• Description: Camelina sativa cas-miR156j mature miRNA
• Sequence: 2 - UGACAGAAGAGAGAGAGCAC - 21
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25826400
   Identification of microRNAs and transcript targets in Camelina sativa by deep sequencing and computational methods
   Poudel S, Aryal N, Lu C
   PLoS One (2015) 10:e0121542