Stem-loop cas-MIR156h

Accession

MI0037169

Description

Camelina sativa cas-MIR156h precursor miRNA

Literature search

1 open access papers mention cas-MIR156h
(4 sentences)

Sequence

aauguUGACAGAAGAAAGAGAGCACagccugggauuagcaaaaagagaguuuugcccuugucgggagugugcucucuuuccuucugccaccauc
.(((.((.((((((((((((((((((.(((((.(...((((((......))))))...).)))))..)))))))))))).)))))).)).))).

Structure

a   u  A      -            -g     g uua      ag 
 aug UG CAGAAG AAAGAGAGCACa  ccugg a   gcaaaa  a
 ||| || |||||| ||||||||||||  ||||| |   ||||||   
 uac ac gucuuc uuucucucgugu  gggcu u   cguuuu  g
c   c  c      c            ga     g ucc      ga 

Annotation confidence Not enough data

Genome context

chr2: 22073348-22073441 [-]

Mature cas-miR156h

• Accession: MIMAT0045277
• Description: Camelina sativa cas-miR156h mature miRNA
• Sequence: 6 - UGACAGAAGAAAGAGAGCAC - 25
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25826400
   Identification of microRNAs and transcript targets in Camelina sativa by deep sequencing and computational methods
   Poudel S, Aryal N, Lu C
   PLoS One (2015) 10:e0121542