miRBase entry: ssc-mir-33b

Stem-loop ssc-mir-33b


Accession
MI0036557
Description
Sus scrofa ssc-mir-33b precursor miRNA

Literature search
3 open access papers mention ssc-mir-33b
(8 sentences)

Sequence

cgggcggccccgcgGUGCAUUGCUGUUGCAUUGCacgugugaggcgggugCAGUGCCUCGGCAGUGCAGCCCggagccggccccuggcaccga
.(((((((.(((.((((((((((((..(((((((((.(((...))).)))))))))..)))))))))).))))).))).))))..........

Structure
---------c    -   c   c  -          UU         g   g 
          gggc ggc ccg gG UGCAUUGCUG  GCAUUGCac ugu  
          |||| ||| ||| || ||||||||||  ||||||||| ||| a
          cccg ccg ggC CC ACGUGACGGC  CGUGACgug gcg  
agccacgguc    g   a   -  G          UC         g   g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ssc-miR-33b-5p

Accession MIMAT0044654
Description Sus scrofa ssc-miR-33b-5p mature miRNA
Sequence 15 - GUGCAUUGCUGUUGCAUUGC - 34
Evidence not_experimental

Mature ssc-miR-33b-3p

Accession MIMAT0044655
Description Sus scrofa ssc-miR-33b-3p mature miRNA
Sequence 51 - CAGUGCCUCGGCAGUGCAGCCC - 72
Evidence not_experimental

References

  1. PubMed ID: 24398549
    MicroRNA-33b downregulates the differentiation and development of porcine preadipocytes
    "Taniguchi M, Nakajima I, Chikuni K, Kojima M, Awata T, Mikawa S"
    "Mol Biol Rep (2014) 41:1081-1090