Stem-loop cst-MIR11333

Accession

MI0036484

Description

Cucumis sativus cst-MIR11333 precursor miRNA

Sequence

gACUUCGCGGUAAGUCUAACCCUAAUUucguaugauaaucuuuugcgacgugucucugcaagacaucggggaaagugaaaugauuauaaaccuuucugcgacgucguguccuuguacaaaauuaggguuagacuuaucgcgacguc
(((.((((((((((((((((((((((((.((((((..((.....(((((((((((.....))))..((.((((((................)))))).)))))))))))..)))))).)))))))))))))))))))))))).)))

Structure

   U                        c      ua  cuuuu       gucucugcaagacau  g      ugaaaug 
gAC UCGCGGUAAGUCUAACCCUAAUUu guauga  au     gcgacgu               cg ggaaag       a
||| |||||||||||||||||||||||| ||||||  ||     |||||||               || ||||||        
cug agcgcuauucagauugggauuaaa cauguu  ug     ugcugca               gc ucuuuc       u
   c                        a      cc  -----       ---------------  g      caaauau 

Annotation confidence Not enough data

Genome context

CM002922.1: 14602554-14602699 [-]

Mature cst-miR11333

• Accession: MIMAT0044623
• Description: Cucumis sativus cst-miR11333 mature miRNA
• Sequence: 2 - ACUUCGCGGUAAGUCUAACCCUAAUU - 27
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26076360
   High-Throughput Sequencing Identifies Novel and Conserved Cucumber (Cucumis sativus L.) microRNAs in Response to Cucumber Green Mottle Mosaic Virus Infection
   Liu HW, Luo LX, Liang CQ, Jiang N, Liu PF, Li JQ
   PLoS One (2015) 10:e0129002