Stem-loop cst-MIR11331

Accession

MI0036482

Description

Cucumis sativus cst-MIR11331 precursor miRNA

Sequence

ggccgagaggacuaaagagaggcucaagcagguauugguuuuaaauuccgauccuaauaacuauuauugcugugugCGUUGAGUAUUAUCUUUCAGUUCucuugugcu
((((((((((((((((((...(((((((((((.(((((.........)))))))((((((...)))))).....))).))))))....))))).)))))))))).)))

Structure

   -          -     -gag      -   --------------------  u     uuu 
ggc cgagaggacu aaaga    gcucaa gca                    gg auugg   u
||| |||||||||| |||||    |||||| |||                    || |||||   a
ucg guucuCUUGA UUUCU    UGAGUU Cgu                    cc uagcc   a
   u          C     AUUA      G   gugucguuauuaucaauaau  -     uua 

Annotation confidence Not enough data

Genome context

CM002927.1: 4355007-4355114 [-]

Mature cst-miR11331

• Accession: MIMAT0044621
• Description: Cucumis sativus cst-miR11331 mature miRNA
• Sequence: 77 - CGUUGAGUAUUAUCUUUCAGUUC - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26076360
   High-Throughput Sequencing Identifies Novel and Conserved Cucumber (Cucumis sativus L.) microRNAs in Response to Cucumber Green Mottle Mosaic Virus Infection
   Liu HW, Luo LX, Liang CQ, Jiang N, Liu PF, Li JQ
   PLoS One (2015) 10:e0129002