Stem-loop fve-MIR11302

Accession

MI0036446

Description

Fragaria vesca fve-MIR11302 precursor miRNA

Sequence

6407 reads, 613.0 reads per million, 18 experiments

accagguggcgguccuccaaaacccggugacgguccuccaaaacccgguggcgguccucaacgGCCACCAGGUUCUUGAGGACCgccaccaguucuuauggaccgccaccagguucuugaggaccaccaccagguuuuggAGGACCGCCAUCACGUUUUGGagaaccgccaucaggu
(((.(((((((((.(((((((((..((((.(((((((((((((((.(((((((((((((((.((((....)))).))))))))))))))).(((((((.(((((.......))))).)))))))........))))))))))))))).))))..))))))))).))))))))).)))

Structure

   a         c         cc    a               -----------------------------------------c               c    A 
acc gguggcggu cuccaaaac  ggug cgguccuccaaaacc                                          gguggcgguccucaa gGCC C
||| ||||||||| |||||||||  |||| |||||||||||||||                                          ||||||||||||||| ||||  
ugg cuaccgcca gaGGUUUUG  CUAC GCCAGGAgguuuugg                                          ccaccgCCAGGAGUU UUGG C
   a         a         CA    C               accaccaccaggaguucuuggaccaccgccagguauucuuga               C    A 

Annotation confidence Low

Genome context

LG4: 21216321-21216497 [+]

Mature fve-miR11302-5p

• Accession: MIMAT0060571
• Description: Fragaria vesca fve-miR11302-5p mature miRNA
• Sequence: 64 - GCCACCAGGUUCUUGAGGACC - 84
• Evidence: experimental ; unknown

Mature fve-miR11302-3p

• Accession: MIMAT0044585
• Description: Fragaria vesca fve-miR11302-3p mature miRNA
• Sequence: 141 - AGGACCGCCAUCACGUUUUGG - 161
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610