Stem-loop fve-MIR482b

Accession

MI0036420

Description

Fragaria vesca fve-MIR482b precursor miRNA

Sequence

gauggugugacagagaagagaaaggaguuggggggaaagggaggaguggccggaaguuguggaguggaguucugggaaagaagaccaugguuuuucucgaaguaauuugggaaaaaaacauugguUCUUUCCUAGUCCUGCCAUUCCuugauuuccugucaugcauc
((((.((((((((.((((...(((((((.((.((((.((((((((....((((((.((........)).))))))........((((((.(((((((((((....)))))))))))..)).))))))))))))..)))).)))))))))..))))))))))))))))

Structure

    g        a    aga       u  g    -a        guggccggaaguuguggaguggaguucugggaaagaag    -  -g           g 
gaug ugugacag gaag   aaggagu gg ggga  agggagga                                      acca ug  uuuuucucgaa u
|||| |||||||| ||||   ||||||| || ||||  ||||||||                                      |||| ||  |||||||||||  
cuac guacuguc cuuu   uuCCUUA CC UCCU  UCCUUUCU                                      uggu ac  aaaaaggguuu a
    -        -    -ag       -  G    GA        --------------------------------------    u  aa           a 

Annotation confidence Not enough data

Genome context

LG6: 2405273-2405439 [+]

Mature fve-miR482b

• Accession: MIMAT0044558
• Description: Fragaria vesca fve-miR482b mature miRNA
• Sequence: 126 - UCUUUCCUAGUCCUGCCAUUCC - 147
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610