Accession
MI0036411
Description
Fragaria vesca
fve-MIR396c precursor miRNA
Sequence
ugauccucuuuguauucUUCCACAGCUUUCUUGAACUGcauccagcauaagagaucugaucuuugcauuugaggcagagguugcucuauauuuggcaugugGUUCAAUAAAGCUGUGGGAAGauacagacagguuca
(((.(((.((((((((.((((((((((((.(((((((((((((((.(((((((...((((((((((.......)))))))))))))).))))))).))))))))))).)))))))))))).)))))))).))).)))
(((.(((.((((((((.((((((((((((.(((((((((((((((.(((((((...((((((((((.......)))))))))))))).))))))).))))))))))).)))))))))))).)))))))).))).)))
Structure
u c c C - c - auc au uga ccu uuuguauu UUCCACAGCUUU UUGAACUGcau ccag aua agag ugaucuuugc u ||| ||| |||||||| |||||||||||| ||||||||||| |||| ||| |||| |||||||||| u acu gga agacauaG AGGGUGUCGAAA AACUUGgugua gguu uau ucuc guuggagacg g u c A U c - a --- ga
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
LG1: 2522051-2522187 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from fve-MIR396c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature fve-miR396c-5p
| Accession | MIMAT0044548 |
| Description | Fragaria vesca fve-miR396c-5p mature miRNA |
| Sequence | 18 - UUCCACAGCUUUCUUGAACUG - 38 |
| Evidence |
experimental
Illumina [1] |
Mature fve-miR396c-3p
| Accession | MIMAT0044549 |
| Description | Fragaria vesca fve-miR396c-3p mature miRNA |
| Sequence | 102 - GUUCAAUAAAGCUGUGGGAAG - 122 |
| Evidence |
experimental
Illumina [1] |
References
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