Stem-loop fve-MIR393a

Accession

MI0036407

Description

Fragaria vesca fve-MIR393a precursor miRNA

Sequence

aaguacuagaggaggcaUCCAAAGGGAUCGCAUUGAUCcuaagcuaacaaagccuuccugaucguaucgaucccuugauagcuucagaucaugcuaucccuuuggauuucuccuuuggaagcuu
((((.((((((((((.((((((((((((.((((.((((..((((((.(((.(.......(((((...)))))).))).))))))..)))))))).)))))))))))).))))))))))..))))

Structure

    -a          c            C    U    cu      a   a ccuuccu     u 
aagu  cuagaggagg aUCCAAAGGGAU GCAU GAUC  aagcua caa g       gaucg  
||||  |||||||||| |||||||||||| |||| ||||  |||||| ||| |       ||||| a
uucg  gguuuccucu uagguuucccua cgua cuag  uucgau guu c       cuagc  
    aa          u            u    -    ac      a   c -------     u 

Annotation confidence Not enough data

Genome context

LG7: 16959667-16959790 [+]

Mature fve-miR393a

• Accession: MIMAT0044542
• Description: Fragaria vesca fve-miR393a mature miRNA
• Sequence: 18 - UCCAAAGGGAUCGCAUUGAUC - 38
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610