Stem-loop gmo-mir-11220b

Accession

MI0036286

Description

Gadus morhua gmo-mir-11220b precursor miRNA

Sequence

ACCCCUAACAUUAGCUUUUUGAuugaaauguuuuuuacauuuuaagagugauauucaaaaagcuaccgcuagguguca
((.((((.(..((((((((((((((((((((.....))))))))).........)))))))))))..).)))).))..

Structure

--  C    A AU           ---------         u 
  AC CCUA C  UAGCUUUUUGA         uugaaaugu u
  || |||| |  |||||||||||         ||||||||| u
  ug ggau g  aucgaaaaacu         aauuuuaca u
ac  u    c cc           uauagugag         u 

Annotation confidence Not enough data

Genome context

CAEA01479115.1: 118-195 [-]

Mature gmo-miR-11220b-5p

• Accession: MIMAT0044402
• Description: Gadus morhua gmo-miR-11220b-5p mature miRNA
• Sequence: 1 - ACCCCUAACAUUAGCUUUUUGA - 22
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305