Stem-loop lja-MIR11132

Accession

MI0035882

Description

Lotus japonicus lja-MIR11132 precursor miRNA

Sequence

guuauccccaacaUUAGCAACUUUGAGUACUUUGAaagugaaauuucaaguucagagugccaaaguugcuaauguaggggugac
((((.((((.(((((((((((((((.((((((((((..(((....)))..))))))))))))))))))))))))).))))))))

Structure

    u    a               A          ag   a 
guua cccc acaUUAGCAACUUUG GUACUUUGAa  uga a
|||| |||| ||||||||||||||| ||||||||||  |||  
cagu gggg uguaaucguugaaac cgugagacuu  acu u
    -    a               -          ga   u 

Annotation confidence Not enough data

Genome context

Chr2: 41984857-41984940 [+]

Mature lja-miR11132-5p

• Accession: MIMAT0043895
• Description: Lotus japonicus lja-miR11132-5p mature miRNA
• Sequence: 14 - UUAGCAACUUUGAGUACUUUGA - 35
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25967282
   micro RNA 172 (miR172) signals epidermal infection and is expressed in cells primed for bacterial invasion in Lotus japonicus roots and nodules
   "Holt DB, Gupta V, Meyer D, Abel NB, Andersen SU, Stougaard J, Markmann K"
   "New Phytol (2015) 208:241-256