Stem-loop lja-MIR11092

Accession

MI0035800

Description

Lotus japonicus lja-MIR11092 precursor miRNA

Sequence

accgugugucaguuuugaaauggguuaaagccauuuuaauggguuucgccuaccgugugucAGUUUGAAACUGACACACGGU
(((((((((((((((((((.(((((.(((.((((....)))).))).)))))...........)))))))))))))))))))

Structure

                   ----------a     u   g    u 
accgugugucaguuuugaa           ugggu aaa ccau u
|||||||||||||||||||           ||||| ||| ||||  
UGGCACACAGUCAAAGUUU           auccg uuu ggua u
                   GAcugugugcc     c   g    a 

Annotation confidence Not enough data

Genome context

Chr1: 30398990-30399071 [+]

Mature lja-miR11092-3p

• Accession: MIMAT0043780
• Description: Lotus japonicus lja-miR11092-3p mature miRNA
• Sequence: 62 - AGUUUGAAACUGACACACGGU - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25967282
   micro RNA 172 (miR172) signals epidermal infection and is expressed in cells primed for bacterial invasion in Lotus japonicus roots and nodules
   "Holt DB, Gupta V, Meyer D, Abel NB, Andersen SU, Stougaard J, Markmann K"
   "New Phytol (2015) 208:241-256