Stem-loop lja-MIR11086

Accession

MI0035788

Description

Lotus japonicus lja-MIR11086 precursor miRNA

Sequence

gagUGUCGAGUUGCUCCAUCUAACcaucgaugauuaugguccaugguUAGAUGAAGCAACUCGACACUu
(((((((((((((((.(((((((((((.(((.......))).))))))))))).)))))))))))))))

Structure

               C           c   ga 
gagUGUCGAGUUGCU CAUCUAACcau gau  u
||||||||||||||| ||||||||||| |||  u
uUCACAGCUCAACGA GUAGAUuggua cug  a
               A           c   gu 

Annotation confidence Not enough data

Genome context

Chr3: 2276459-2276527 [+]

Mature lja-miR11086-5p

• Accession: MIMAT0043765
• Description: Lotus japonicus lja-miR11086-5p mature miRNA
• Sequence: 4 - UGUCGAGUUGCUCCAUCUAAC - 24
• Evidence: experimental ; Illumina [1]

Mature lja-miR11086-3p

• Accession: MIMAT0043766
• Description: Lotus japonicus lja-miR11086-3p mature miRNA
• Sequence: 48 - UAGAUGAAGCAACUCGACACU - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25967282
   micro RNA 172 (miR172) signals epidermal infection and is expressed in cells primed for bacterial invasion in Lotus japonicus roots and nodules
   "Holt DB, Gupta V, Meyer D, Abel NB, Andersen SU, Stougaard J, Markmann K"
   "New Phytol (2015) 208:241-256