Stem-loop lja-MIR11084

Accession

MI0035786

Description

Lotus japonicus lja-MIR11084 precursor miRNA

Sequence

gaUUUCUGGAUCCACGUUUGGCcucucuagauuugaaaccaaacacacacauacuuaguuccaaacuuggaucccaaaguc
(((((..(((((((.((((((.....((((...((..............))...))))..)))))).)))))))..)))))

Structure

     CU       C      Ccucu    auu  aaacca 
gaUUU  GGAUCCA GUUUGG     cuag   ug      a
|||||  ||||||| ||||||     ||||   ||       
cugaa  ccuaggu caaacc     gauu   ac      a
     ac       u      ---uu    cau  acacac 

Annotation confidence Not enough data

Genome context

Chr2: 43894277-43894357 [-]

Mature lja-miR11084-5p

• Accession: MIMAT0043762
• Description: Lotus japonicus lja-miR11084-5p mature miRNA
• Sequence: 3 - UUUCUGGAUCCACGUUUGGC - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25967282
   micro RNA 172 (miR172) signals epidermal infection and is expressed in cells primed for bacterial invasion in Lotus japonicus roots and nodules
   "Holt DB, Gupta V, Meyer D, Abel NB, Andersen SU, Stougaard J, Markmann K"
   "New Phytol (2015) 208:241-256