miRBase entry: eel-mir-7552-1

Stem-loop eel-mir-7552-1


Accession
MI0035732
Description
Electrophorus electricus eel-mir-7552-1 precursor miRNA


Sequence

uaaucUUACAAUUAAAGGAUAUUUCUUgcaaguuaaugcgaaaacggaAAUGUCCCUUAAUUGUUUGGCUaaguauauuc
...((..((((((((.((((((((((((((......)))).....)))))))))).))))))))..))............

Structure
---------uaa  UU        A          -----    ag 
            uc  ACAAUUAA GGAUAUUUCU     Ugca  u
            ||  |||||||| ||||||||||     ||||   
            GG  UGUUAAUU CCUGUAAagg     gcgu  u
cuuauaugaaUC  UU        C          caaaa    aa 


Annotation confidence Not enough data
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Genome context
scaffold7041: 23184-23263 [+]

Database links

Mature eel-miR-7552-5p

Accession MIMAT0043693
Description Electrophorus electricus eel-miR-7552-5p mature miRNA
Sequence 6 - UUACAAUUAAAGGAUAUUUCUU - 27
Evidence experimental
Illumina [1]

Mature eel-miR-7552-3p

Accession MIMAT0043694
Description Electrophorus electricus eel-miR-7552-3p mature miRNA
Sequence 49 - AAUGUCCCUUAAUUGUUUGGCU - 70
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25887781
    Unique patterns of transcript and miRNA expression in the South American strong voltage electric eel (Electrophorus electricus)
    Traeger LL, Volkening JD, Moffett H, Gallant JR, Chen PH, Novina CD, Phillips GN Jr, Anand R, Wells GB, Pinch M, Güth R, Unguez GA, Albert JS, Zakon H, Sussman MR, Samanta MP
    BMC Genomics (2015) 16:243