Stem-loop eel-mir-7552-1

Accession

MI0035732

Description

Electrophorus electricus eel-mir-7552-1 precursor miRNA

Sequence

uaaucUUACAAUUAAAGGAUAUUUCUUgcaaguuaaugcgaaaacggaAAUGUCCCUUAAUUGUUUGGCUaaguauauuc
...((..((((((((.((((((((((((((......)))).....)))))))))).))))))))..))............

Structure

---------uaa  UU        A          -----    ag 
            uc  ACAAUUAA GGAUAUUUCU     Ugca  u
            ||  |||||||| ||||||||||     ||||   
            GG  UGUUAAUU CCUGUAAagg     gcgu  u
cuuauaugaaUC  UU        C          caaaa    aa 

Annotation confidence Not enough data

Genome context

scaffold7041: 23184-23263 [+]

Mature eel-miR-7552-5p

• Accession: MIMAT0043693
• Description: Electrophorus electricus eel-miR-7552-5p mature miRNA
• Sequence: 6 - UUACAAUUAAAGGAUAUUUCUU - 27
• Evidence: experimental ; Illumina [1]

Mature eel-miR-7552-3p

• Accession: MIMAT0043694
• Description: Electrophorus electricus eel-miR-7552-3p mature miRNA
• Sequence: 49 - AAUGUCCCUUAAUUGUUUGGCU - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25887781
   Unique patterns of transcript and miRNA expression in the South American strong voltage electric eel (Electrophorus electricus)
   Traeger LL, Volkening JD, Moffett H, Gallant JR, Chen PH, Novina CD, Phillips GN Jr, Anand R, Wells GB, Pinch M, Güth R, Unguez GA, Albert JS, Zakon H, Sussman MR, Samanta MP
   BMC Genomics (2015) 16:243