Stem-loop eel-mir-11063

Accession

MI0035730

Description

Electrophorus electricus eel-mir-11063 precursor miRNA

Sequence

gagggcuauggaccugauggACCUCUGAGUCUGAUCGGAAGCugauguugguguaUUCCGAUCGGACUCGGAGGUCCauc
.(((........)))((((((((((((((((((((((((((((......)))...)))))))))))))))))))))))))

Structure

gagggcuauggaccu                         ---   ga 
               gauggACCUCUGAGUCUGAUCGGAA   GCu  u
               |||||||||||||||||||||||||   |||   
               cuaCCUGGAGGCUCAGGCUAGCCUU   ugg  g
---------------                         aug   uu 

Annotation confidence Not enough data

Genome context

scaffold4083: 167284-167363 [+]

Mature eel-miR-11063-5p

• Accession: MIMAT0043690
• Description: Electrophorus electricus eel-miR-11063-5p mature miRNA
• Sequence: 21 - ACCUCUGAGUCUGAUCGGAAGC - 42
• Evidence: experimental ; Illumina [1]

Mature eel-miR-11063-3p

• Accession: MIMAT0043691
• Description: Electrophorus electricus eel-miR-11063-3p mature miRNA
• Sequence: 56 - UUCCGAUCGGACUCGGAGGUCC - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25887781
   Unique patterns of transcript and miRNA expression in the South American strong voltage electric eel (Electrophorus electricus)
   Traeger LL, Volkening JD, Moffett H, Gallant JR, Chen PH, Novina CD, Phillips GN Jr, Anand R, Wells GB, Pinch M, Güth R, Unguez GA, Albert JS, Zakon H, Sussman MR, Samanta MP
   BMC Genomics (2015) 16:243