Stem-loop eel-mir-11062

Accession

MI0035729

Description

Electrophorus electricus eel-mir-11062 precursor miRNA

Sequence

aacaAAGGGCUAUGUUUACACUUAGUacccgcuucugcaauggguuUAUAAUGUCAGCAUAGUCCGACaaaucuuaguugggac
......((((((((((.(((.(((..((((((....))...))))...)))))).))))))))))...................

Structure

-------------aacaAA          U   C   -GU    ---  u 
                   GGGCUAUGUU ACA UUA   accc   gc u
                   |||||||||| ||| |||   ||||   ||  
                   CCUGAUACGA UGU AAU   uggg   cg c
caggguugauucuaaaCAG          C   -   AUu    uaa  u 

Annotation confidence Not enough data

Genome context

scaffold859: 110930-111013 [+]

Mature eel-miR-11062-5p

• Accession: MIMAT0043688
• Description: Electrophorus electricus eel-miR-11062-5p mature miRNA
• Sequence: 5 - AAGGGCUAUGUUUACACUUAGU - 26
• Evidence: experimental ; Illumina [1]

Mature eel-miR-11062-3p

• Accession: MIMAT0043689
• Description: Electrophorus electricus eel-miR-11062-3p mature miRNA
• Sequence: 47 - UAUAAUGUCAGCAUAGUCCGAC - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25887781
   Unique patterns of transcript and miRNA expression in the South American strong voltage electric eel (Electrophorus electricus)
   Traeger LL, Volkening JD, Moffett H, Gallant JR, Chen PH, Novina CD, Phillips GN Jr, Anand R, Wells GB, Pinch M, Güth R, Unguez GA, Albert JS, Zakon H, Sussman MR, Samanta MP
   BMC Genomics (2015) 16:243