Stem-loop eel-mir-11060

Accession

MI0035727

Description

Electrophorus electricus eel-mir-11060 precursor miRNA

Sequence

cacuguucgccugcuggucUGUGGCCAGUUUUAGUGCUCAUCagauuaggaucugucUUGAGAACUAACUGACCAGAGAucauc
..............((((((.(((.((((..((((.((((.(((((....)))))...)))).)))))))).))).))))))..

Structure

cacuguucgccugc      G   C    UU    G    --U     u 
              uggucU UGG CAGU  UAGU CUCA   Cagau a
              |||||| ||| ||||  |||| ||||   |||||  
              acuAGA ACC GUCA  AUCA GAGU   gucua g
------------cu      G   A    --    A    Ucu     g 

Annotation confidence Not enough data

Genome context

scaffold11027: 105543-105626 [+]

Mature eel-miR-11060-5p

• Accession: MIMAT0043685
• Description: Electrophorus electricus eel-miR-11060-5p mature miRNA
• Sequence: 20 - UGUGGCCAGUUUUAGUGCUCAUC - 42
• Evidence: experimental ; Illumina [1]

Mature eel-miR-11060-3p

• Accession: MIMAT0043686
• Description: Electrophorus electricus eel-miR-11060-3p mature miRNA
• Sequence: 58 - UUGAGAACUAACUGACCAGAGA - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25887781
   Unique patterns of transcript and miRNA expression in the South American strong voltage electric eel (Electrophorus electricus)
   Traeger LL, Volkening JD, Moffett H, Gallant JR, Chen PH, Novina CD, Phillips GN Jr, Anand R, Wells GB, Pinch M, Güth R, Unguez GA, Albert JS, Zakon H, Sussman MR, Samanta MP
   BMC Genomics (2015) 16:243