Stem-loop eel-mir-11059

Accession

MI0035726

Description

Electrophorus electricus eel-mir-11059 precursor miRNA

Sequence

auaucauuggcauuagcuugAAUGAUCUUAGUCAUCUUUAUauuaaguuauagccaUAAAGAGGACAAAGGCCAUUCUggca
...............(((.(((((.((((.(((.(((((((..............))))))).))).)))).))))).))).

Structure

auaucauuggcauua   u     A    A   A       auuaag 
               gcu gAAUG UCUU GUC UCUUUAU      u
               ||| ||||| |||| ||| |||||||       
               cgg CUUAC GGAA CAG AGAAAUa      u
--------------a   U     C    A   G       ccgaua 

Annotation confidence Not enough data

Genome context

scaffold586: 418045-418126 [+]

Mature eel-miR-11059-5p

• Accession: MIMAT0043683
• Description: Electrophorus electricus eel-miR-11059-5p mature miRNA
• Sequence: 21 - AAUGAUCUUAGUCAUCUUUAU - 41
• Evidence: experimental ; Illumina [1]

Mature eel-miR-11059-3p

• Accession: MIMAT0043684
• Description: Electrophorus electricus eel-miR-11059-3p mature miRNA
• Sequence: 57 - UAAAGAGGACAAAGGCCAUUCU - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25887781
   Unique patterns of transcript and miRNA expression in the South American strong voltage electric eel (Electrophorus electricus)
   Traeger LL, Volkening JD, Moffett H, Gallant JR, Chen PH, Novina CD, Phillips GN Jr, Anand R, Wells GB, Pinch M, Güth R, Unguez GA, Albert JS, Zakon H, Sussman MR, Samanta MP
   BMC Genomics (2015) 16:243