Stem-loop eel-mir-11057

Accession

MI0035724

Description

Electrophorus electricus eel-mir-11057 precursor miRNA

Sequence

aaaacuguaguuugauuuugUACUUUGACUGCGUUUAUAAGCauguuuuuaagugcUUGUAAUUACAGUCAGUGUAGUgaau
..............((((..(((.(((((((...((((((((((........))))))))))...))))))).)))..))))

Structure

aaaacuguaguuug    ug   U       CGU          guu 
              auuu  UAC UUGACUG   UUAUAAGCau   u
              ||||  ||| |||||||   ||||||||||    
              uaag  AUG GACUGAC   AAUGUUcgug   u
--------------    UG   U       AUU          aau 

Annotation confidence Not enough data

Genome context

scaffold4451: 85578-85659 [-]

Mature eel-miR-11057-5p

• Accession: MIMAT0043680
• Description: Electrophorus electricus eel-miR-11057-5p mature miRNA
• Sequence: 21 - UACUUUGACUGCGUUUAUAAGC - 42
• Evidence: experimental ; Illumina [1]

Mature eel-miR-11057-3p

• Accession: MIMAT0043681
• Description: Electrophorus electricus eel-miR-11057-3p mature miRNA
• Sequence: 57 - UUGUAAUUACAGUCAGUGUAGU - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25887781
   Unique patterns of transcript and miRNA expression in the South American strong voltage electric eel (Electrophorus electricus)
   Traeger LL, Volkening JD, Moffett H, Gallant JR, Chen PH, Novina CD, Phillips GN Jr, Anand R, Wells GB, Pinch M, Güth R, Unguez GA, Albert JS, Zakon H, Sussman MR, Samanta MP
   BMC Genomics (2015) 16:243