Stem-loop eel-mir-11056

Accession

MI0035723

Description

Electrophorus electricus eel-mir-11056 precursor miRNA

Sequence

ugguacacucuuccUAAACUGGCAAGUAGGAAACAUuuguguauauauauaacuguuuCAUACUCGCCAGUUUAGGAAGagugu
....(((((((((((((((((((.((((.((((((.((((((....)))))).)))))).)))).)))))))))))))))))))

Structure

uggu                   A    G      U      a 
    acacucuuccUAAACUGGC AGUA GAAACA uugugu u
    ||||||||||||||||||| |||| |||||| ||||||  
    ugugaGAAGGAUUUGACCG UCAU Cuuugu aauaua a
----                   C    A      c      u 

Annotation confidence Not enough data

Genome context

scaffold674: 73113-73196 [+]

Mature eel-miR-11056-5p

• Accession: MIMAT0043678
• Description: Electrophorus electricus eel-miR-11056-5p mature miRNA
• Sequence: 15 - UAAACUGGCAAGUAGGAAACAU - 36
• Evidence: experimental ; Illumina [1]

Mature eel-miR-11056-3p

• Accession: MIMAT0043679
• Description: Electrophorus electricus eel-miR-11056-3p mature miRNA
• Sequence: 59 - CAUACUCGCCAGUUUAGGAAG - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25887781
   Unique patterns of transcript and miRNA expression in the South American strong voltage electric eel (Electrophorus electricus)
   Traeger LL, Volkening JD, Moffett H, Gallant JR, Chen PH, Novina CD, Phillips GN Jr, Anand R, Wells GB, Pinch M, Güth R, Unguez GA, Albert JS, Zakon H, Sussman MR, Samanta MP
   BMC Genomics (2015) 16:243