Stem-loop eel-mir-11054

Accession

MI0035720

Description

Electrophorus electricus eel-mir-11054 precursor miRNA

Literature search

1 open access papers mention eel-mir-11054
(6 sentences)

Sequence

ggagguagaagugagagaguuAGUGUUUGUUGCCAGAGUAAGGaacaccuguuucUUACUCUGACAGCAAAACACAGUgc
......................((((((((((.(((((((((((((....))))))))))))).)))).)))))).....

Structure

ggagguagaagugagagaguuA      -    C             a 
                      GUGUUU GUUG CAGAGUAAGGaac c
                      |||||| |||| |||||||||||||  
                      CACAAA CGAC GUCUCAUUcuuug c
-----------------cgUGA      A    A             u 

Annotation confidence Not enough data

Genome context

scaffold5041: 27199-27278 [-]

Mature eel-miR-11054-5p

• Accession: MIMAT0043672
• Description: Electrophorus electricus eel-miR-11054-5p mature miRNA
• Sequence: 22 - AGUGUUUGUUGCCAGAGUAAGG - 43
• Evidence: experimental ; Illumina [1]

Mature eel-miR-11054-3p

• Accession: MIMAT0043673
• Description: Electrophorus electricus eel-miR-11054-3p mature miRNA
• Sequence: 56 - UUACUCUGACAGCAAAACACAGU - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25887781
   Unique patterns of transcript and miRNA expression in the South American strong voltage electric eel (Electrophorus electricus)
   Traeger LL, Volkening JD, Moffett H, Gallant JR, Chen PH, Novina CD, Phillips GN Jr, Anand R, Wells GB, Pinch M, Güth R, Unguez GA, Albert JS, Zakon H, Sussman MR, Samanta MP
   BMC Genomics (2015) 16:243