Stem-loop eel-mir-8160

Accession

MI0035719

Description

Electrophorus electricus eel-mir-8160 precursor miRNA

Sequence

uggguAGAAUAAUGCCAGCAGUCGGCCgauuauuucauuaggCCAGCACUGGUAUUAUUGCACucaacacugagauuucu
(((((..(((((((((((..((.((((.............)))).)).)))))))))))..)))))..............

Structure

--------------     AG           CA  C    gauua 
              ugggu  AAUAAUGCCAG  GU GGCC     u
              |||||  |||||||||||  || ||||     u
              acuCA  UUAUUAUGGUC  CG CCgg     u
ucuuuagagucaca     CG           -A  A    auuac 

Annotation confidence Not enough data

Genome context

scaffold6123: 22567-22646 [+]

Mature eel-miR-8160-5p

• Accession: MIMAT0043670
• Description: Electrophorus electricus eel-miR-8160-5p mature miRNA
• Sequence: 6 - AGAAUAAUGCCAGCAGUCGGCC - 27
• Evidence: experimental ; Illumina [1]

Mature eel-miR-8160-3p

• Accession: MIMAT0043671
• Description: Electrophorus electricus eel-miR-8160-3p mature miRNA
• Sequence: 43 - CCAGCACUGGUAUUAUUGCAC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25887781
   Unique patterns of transcript and miRNA expression in the South American strong voltage electric eel (Electrophorus electricus)
   Traeger LL, Volkening JD, Moffett H, Gallant JR, Chen PH, Novina CD, Phillips GN Jr, Anand R, Wells GB, Pinch M, Güth R, Unguez GA, Albert JS, Zakon H, Sussman MR, Samanta MP
   BMC Genomics (2015) 16:243