Stem-loop eel-mir-11050

Accession

MI0035715

Description

Electrophorus electricus eel-mir-11050 precursor miRNA

Sequence

caugaaauGUGCGAUGAUGACUACUUUCUgcugagguuacaaccagugaaccUAAUAGCAUGUAUUACCUGAGCacaugu
......((((((...(.(((.(((....((((((((((((.....))).))))..))))).)))))).)...))))))..

Structure

caugaa      GAU A   C   UUUC     --    -   a 
      auGUGC   G UGA UAC    Ugcug  aggu uac a
      ||||||   | ||| |||    |||||  |||| ||| c
      uacaCG   C AUU AUG    ACGAU  Ucca gug c
----ug      AGU C   -   ---U     AA    a   a 

Annotation confidence Not enough data

Genome context

scaffold9098: 78872-78951 [+]

Mature eel-miR-11050-5p

• Accession: MIMAT0043664
• Description: Electrophorus electricus eel-miR-11050-5p mature miRNA
• Sequence: 9 - GUGCGAUGAUGACUACUUUCU - 29
• Evidence: experimental ; Illumina [1]

Mature eel-miR-11050-3p

• Accession: MIMAT0043665
• Description: Electrophorus electricus eel-miR-11050-3p mature miRNA
• Sequence: 53 - UAAUAGCAUGUAUUACCUGAGC - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25887781
   Unique patterns of transcript and miRNA expression in the South American strong voltage electric eel (Electrophorus electricus)
   Traeger LL, Volkening JD, Moffett H, Gallant JR, Chen PH, Novina CD, Phillips GN Jr, Anand R, Wells GB, Pinch M, Güth R, Unguez GA, Albert JS, Zakon H, Sussman MR, Samanta MP
   BMC Genomics (2015) 16:243