Stem-loop oni-mir-181c-1

Accession

MI0035468

Description

Oreochromis niloticus oni-mir-181c-1 precursor miRNA

Literature search

2 open access papers mention oni-mir-181c-1
(3 sentences)

Sequence

AACAUUCAACGCUGUCGGUGAGuuugagcucugacugaaaaccaucgaccguugacuguacc
.(((.((((((..(((((((..(((.((......)).)))..))))))))))))).)))...

Structure

--A   U      CU       AG   g  cu 
   ACA UCAACG  GUCGGUG  uuu ag  c
   ||| ||||||  |||||||  ||| ||   
   ugu aguugc  cagcuac  aaa uc  u
cca   c      --       ca   g  ag 

Annotation confidence Not enough data

Genome context

CM001455.1: 964919-964980 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-181c-1

Mature oni-miR-181c

• Accession: MIMAT0043428
• Description: Oreochromis niloticus oni-miR-181c mature miRNA
• Sequence: 1 - AACAUUCAACGCUGUCGGUGAG - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774