Stem-loop oni-mir-10848

Accession

MI0035399

Description

Oreochromis niloticus oni-mir-10848 precursor miRNA

Sequence

123 reads, 0.0 reads per million, 38 experiments

ACUGCGGCUGACAGGUCGGACGGGagaggugcucugccauccucgUCCGACCUUGGUCCGCUGGACU
..(.((((.(((((((((((((((.(((((.....))).))))))))))))))..))).)))).)..

Structure

AC G    U   --            a  -   g 
  U CGGC GAC  AGGUCGGACGGG ga ggu c
  | |||| |||  |||||||||||| || ||| u
  A GUCG CUG  UCCAGCCUgcuc cu ccg c
UC G    C   GU            -  a   u 

Annotation confidence High

Genome context

CM001447.1: 9727376-9727442 [-]

Mature oni-miR-10848-5p

• Accession: MIMAT0059724
• Description: Oreochromis niloticus oni-miR-10848-5p mature miRNA
• Sequence: 1 - ACUGCGGCUGACAGGUCGGACGGG - 24
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10848-3p

• Accession: MIMAT0043366
• Description: Oreochromis niloticus oni-miR-10848-3p mature miRNA
• Sequence: 46 - UCCGACCUUGGUCCGCUGGACU - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774