Stem-loop oni-mir-10788

Accession

MI0035324

Description

Oreochromis niloticus oni-mir-10788 precursor miRNA

Sequence

60 reads, 0.0 reads per million, 16 experiments

AUUGCGACGUAGACCCGUAGCAgauauuaaucuuuugCUGCUGGGCUGCCUCGCUGGGC
...((((.((((.(((((((((((.........)))))))).))))))).)))).....

Structure

--AUU    C    A   -        uau 
     GCGA GUAG CCC GUAGCAga   u
     |||| |||| ||| ||||||||   a
     CGCU CGUC GGG CGUCguuu   a
CGGGU    C    -   U        ucu 

Annotation confidence High

Genome context

CM001447.1: 21425953-21426011 [-]

Mature oni-miR-10788-5p

• Accession: MIMAT0043297
• Description: Oreochromis niloticus oni-miR-10788-5p mature miRNA
• Sequence: 1 - AUUGCGACGUAGACCCGUAGCA - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10788-3p

• Accession: MIMAT0059697
• Description: Oreochromis niloticus oni-miR-10788-3p mature miRNA
• Sequence: 38 - CUGCUGGGCUGCCUCGCUGGGC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774