Stem-loop pny-mir-99a

Accession

MI0035018

Description

Pundamilia nyererei pny-mir-99a precursor miRNA

Sequence

AGACCUGUAGAUACAAGCUUGUggugucacuuaacacaaguucggaucuacggguuu
.((((((((((..(.((((((((...........)))))))).)..)))))))))).

Structure

A          UA A        gugu 
 GACCUGUAGA  C AGCUUGUg    c
 ||||||||||  | ||||||||    a
 uugggcaucu  g uugaacac    c
u          ag c        aauu 

Annotation confidence Not enough data

Genome context

JH419670.1: 108487-108543 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from pny-mir-99a

Mature pny-miR-99a

• Accession: MIMAT0043012
• Description: Pundamilia nyererei pny-miR-99a mature miRNA
• Sequence: 1 - AGACCUGUAGAUACAAGCUUGU - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381