Stem-loop pny-mir-125c

Accession

MI0035012

Description

Pundamilia nyererei pny-mir-125c precursor miRNA

Sequence

ucccugagacccuaacuugugacguugugcuuucauguccACGGGUUAGGCUCUCGGGAGCU
..(((((((.(((((((((((((((.(......))))).))))))))))).)))))))....

Structure

--uc       c           -    u ug 
    ccugaga ccuaacuugug acgu g  c
    ||||||| ||||||||||| |||| |   
    GGGCUCU GGAUUGGGCAc ugua c  u
UCGA       C           c    - uu 

Annotation confidence Not enough data

Genome context

JH419670.1: 100532-100593 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from pny-mir-125c

Mature pny-miR-125c

• Accession: MIMAT0043005
• Description: Pundamilia nyererei pny-miR-125c mature miRNA
• Sequence: 41 - ACGGGUUAGGCUCUCGGGAGCU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381