Stem-loop pny-let-7f

Accession

MI0035000

Description

Pundamilia nyererei pny-let-7f precursor miRNA

Sequence

UGAGGUAGUAGAUUGUGUAGUUuuaggguagugauuuugcccucuuuaggagauaacuauacaaucuauugccuuccc
.(((((((((((((((((((((..(((((((.....)))))))...........)))))))))))))))))))))...

Structure

--U                     ---------uu       u 
   GAGGUAGUAGAUUGUGUAGUU           aggguag g
   |||||||||||||||||||||           ||||||| a
   uuccguuaucuaacauaucaa           ucccguu u
ccc                     uagaggauuuc       u 

Annotation confidence Not enough data

Genome context

JH419226.1: 4359382-4359459 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pny-let-7f

Mature pny-let-7f

• Accession: MIMAT0042995
• Description: Pundamilia nyererei pny-let-7f mature miRNA
• Sequence: 1 - UGAGGUAGUAGAUUGUGUAGUU - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381