Stem-loop pny-mir-133-3

Accession

MI0034965

Description

Pundamilia nyererei pny-mir-133-3 precursor miRNA

Sequence

agcugguaaaauggaaccaaaucaccucuugaauggaUUUGGUCCCCUUCAACCAGCU
(((((((..((.((.((((((((............)))))))).)).))..)))))))

Structure

       aa  u  a        accuc 
agcuggu  aa gg accaaauc     u
|||||||  || || ||||||||      
UCGACCA  UU CC UGGUUUag     u
       AC  C  C        guaag 

Annotation confidence Not enough data

Genome context

JH419326.1: 1863609-1863666 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pny-mir-133-3

Mature pny-miR-133

• Accession: MIMAT0042901
• Description: Pundamilia nyererei pny-miR-133 mature miRNA
• Sequence: 38 - UUUGGUCCCCUUCAACCAGCU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381