Stem-loop pny-mir-96-2

Accession

MI0034959

Description

Pundamilia nyererei pny-mir-96-2 precursor miRNA

Sequence

UUUGGCACUAGCACAUUUUUGCUuuguuucuccucuuuugagcaaucauguguggugccaauau
.(((((((((.(((((..((((((...............))))))..))))))))))))))...

Structure

--U         G     UU      uguuuc 
   UUGGCACUA CACAU  UUGCUu      u
   ||||||||| |||||  ||||||      c
   aaccguggu gugua  aacgag      c
uau         -     cu      uuuucu 

Annotation confidence Not enough data

Genome context

JH419375.1: 221831-221894 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pny-mir-96-2

Mature pny-miR-96

• Accession: MIMAT0042931
• Description: Pundamilia nyererei pny-miR-96 mature miRNA
• Sequence: 1 - UUUGGCACUAGCACAUUUUUGCU - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381