Stem-loop pny-mir-24a-4

Accession

MI0034932

Description

Pundamilia nyererei pny-mir-24a-4 precursor miRNA

Sequence

ugccuacugagcugauaacaguuagauguuaacaagcacUGGCUCAGUUCAGCAGGAAC
..(((.(((((((((.....(((((.((((....)))))))))))))))))).)))...

Structure

-ug   a         uaaca     a    a 
   ccu cugagcuga     guuag uguu a
   ||| |||||||||     ||||| ||||  
   GGA GACUUGACU     CGGUc acga c
CAA   C         -----     -    a 

Annotation confidence Not enough data

Genome context

JH419326.1: 1518568-1518626 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from pny-mir-24a-4

Mature pny-miR-24a-4

• Accession: MIMAT0042945
• Description: Pundamilia nyererei pny-miR-24a-4 mature miRNA
• Sequence: 40 - UGGCUCAGUUCAGCAGGAAC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381