Stem-loop pny-mir-499

Accession

MI0034913

Description

Pundamilia nyererei pny-mir-499 precursor miRNA

Sequence

6340 reads, 532.0 reads per million, 7 experiments

UUAAGACUUGCAGUGAUGUUUAgggcaaugaucacaugAACAUCACUUUAAGUCUGUGCU
...(((((((.(((((((((((.(..........).))))))))))).))))))).....

Structure

--UUA       C           g gcaa 
     AGACUUG AGUGAUGUUUA g    u
     ||||||| ||||||||||| |     
     UCUGAAU UCACUACAAgu c    g
UCGUG       U           a acua 

Annotation confidence High

Genome context

JH419383.1: 188525-188584 [+]

Mature pny-miR-499-5p

• Accession: MIMAT0042934
• Description: Pundamilia nyererei pny-miR-499-5p mature miRNA
• Sequence: 1 - UUAAGACUUGCAGUGAUGUUUA - 22
• Evidence: experimental ; Illumina [1]

Mature pny-miR-499-3p

• Accession: MIMAT0060357
• Description: Pundamilia nyererei pny-miR-499-3p mature miRNA
• Sequence: 39 - AACAUCACUUUAAGUCUGUGCU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381