Stem-loop pny-mir-15a

Accession

MI0034891

Description

Pundamilia nyererei pny-mir-15a precursor miRNA

Sequence

UAGCAGCACGGAAUGGUUUGUggguuauacugagaugcaggccauacugugcugccgca
..(((((((((.((((((((((..(((...)))..)))))))))).)))))))))....

Structure

--UA         A          gg   u 
    GCAGCACGG AUGGUUUGUg  uua  
    ||||||||| ||||||||||  ||| a
    cgucguguc uaccggacgu  agu  
acgc         a          ag   c 

Annotation confidence Not enough data

Genome context

JH419260.1: 2488077-2488135 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pny-mir-15a

Mature pny-miR-15a

• Accession: MIMAT0042915
• Description: Pundamilia nyererei pny-miR-15a mature miRNA
• Sequence: 1 - UAGCAGCACGGAAUGGUUUGU - 21
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381