Stem-loop pny-mir-107

Accession

MI0034885

Description

Pundamilia nyererei pny-mir-107 precursor miRNA

Sequence

agcuucuuuacaguguugccuuguggcauggcgaucaAGCAGCAUUGUACAGGGCUAUC
((((.((.(((((((((((.((((.((...)).).)))))))))))))).))))))...

Structure

---    u  u           c   - g  a 
   agcu cu uacaguguugc uug u gc  
   |||| || ||||||||||| ||| | || u
   UCGG GA AUGUUACGACG Aac a cg  
CUA    -  C           -   u g  g 

Annotation confidence Not enough data

Genome context

JH419259.1: 3180822-3180880 [+]

Mature pny-miR-107

• Accession: MIMAT0042909
• Description: Pundamilia nyererei pny-miR-107 mature miRNA
• Sequence: 38 - AGCAGCAUUGUACAGGGCUAUC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381