Stem-loop pny-mir-144

Accession

MI0034880

Description

Pundamilia nyererei pny-mir-144 precursor miRNA

Sequence

AGGAUAUCAUCUUAUACUGUAAGUuuaaaaaagagacacuacaguauagaugauguacu
...(((((((((.((((((((.((((.......))))..)))))))))))))))))...

Structure

AGG         U        -A    aa 
   AUAUCAUCU AUACUGUA  GUuu  a
   ||||||||| ||||||||  ||||  a
   uguaguaga uaugacau  caga  a
uca         -        ca    ga 

Annotation confidence Not enough data

Genome context

JH419285.1: 653561-653619 [+]

Mature pny-miR-144

• Accession: MIMAT0042906
• Description: Pundamilia nyererei pny-miR-144 mature miRNA
• Sequence: 1 - AGGAUAUCAUCUUAUACUGUAAGU - 24
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381