Stem-loop pny-mir-130a-1

Accession

MI0034869

Description

Pundamilia nyererei pny-mir-130a-1 precursor miRNA

Sequence

gcccuuuuucuguugcacuacuggacacugagaugagCAGUGCAAUAUUAAAAGGGCA
((((((((..(((((((((.((.............)).)))))))))..)))))))).

Structure

-        uc         a  ggaca 
 gcccuuuu  uguugcacu cu     c
 ||||||||  ||||||||| ||     u
 CGGGAAAA  AUAACGUGA ga     g
A        UU         C  guaga 

Annotation confidence Not enough data

Genome context

JH419268.1: 1907856-1907913 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pny-mir-130a-1

Mature pny-miR-130a

• Accession: MIMAT0042899
• Description: Pundamilia nyererei pny-miR-130a mature miRNA
• Sequence: 38 - CAGUGCAAUAUUAAAAGGGCA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381