Stem-loop pny-let-7i-1

Accession

MI0034867

Description

Pundamilia nyererei pny-let-7i-1 precursor miRNA

Sequence

UGAGGUAGUAGUUUGUGCUGUUgguuggguugagacacugcccgcuauggagaugacugcgcaagcuacugccuugcu
.(((((((((((((((((.((((((.((((.........)))))))........))).)))))))))))))))))...

Structure

--U                 U   --------   u    uga 
   GAGGUAGUAGUUUGUGC GUU        ggu gggu   g
   ||||||||||||||||| |||        ||| ||||   a
   uuccgucaucgaacgcg cag        ucg cccg   c
ucg                 u   uagaggua   -    uca 

Annotation confidence Not enough data

Genome context

JH419232.1: 4597577-4597654 [+]

Mature pny-let-7i

• Accession: MIMAT0042898
• Description: Pundamilia nyererei pny-let-7i mature miRNA
• Sequence: 1 - UGAGGUAGUAGUUUGUGCUGUU - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381