Stem-loop pny-let-7e-1

Accession

MI0034860

Description

Pundamilia nyererei pny-let-7e-1 precursor miRNA

Sequence

UGAGGUAGUAGAUUGAAUAGUUgugggguuuacguccuccuuuugagauaacuauacaaucuacugucuuucc
.((((((((((((((.((((((((((((........)))).......)))))))).))))))))))))))...

Structure

--U              A        -------    uuu 
   GAGGUAGUAGAUUG AUAGUUgu       gggg   a
   |||||||||||||| ||||||||       ||||    
   uucugucaucuaac uaucaaua       ccuc   c
ccu              a        gaguuuu    cug 

Annotation confidence Not enough data

Genome context

JH419239.1: 3285435-3285507 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pny-let-7e-1

Mature pny-let-7e

• Accession: MIMAT0042895
• Description: Pundamilia nyererei pny-let-7e mature miRNA
• Sequence: 1 - UGAGGUAGUAGAUUGAAUAGUU - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381