Stem-loop pny-mir-140

Accession

MI0034807

Description

Pundamilia nyererei pny-mir-140 precursor miRNA

Sequence

cagugguuuuacccuaugguaggugacaucaugcuguucuACCACAGGGUAGAACCACGGACG
..(((((((((((((.((((((..((((......)))))))))).))))))))))))).....

Structure

---ca             a      gu    uc 
     gugguuuuacccu ugguag  gaca  a
     ||||||||||||| ||||||  ||||   
     CACCAAGAUGGGA ACCAuc  uugu  u
GCAGG             C      --    cg 

Annotation confidence Not enough data

Genome context

JH419508.1: 521159-521221 [+]

Mature pny-miR-140

• Accession: MIMAT0042864
• Description: Pundamilia nyererei pny-miR-140 mature miRNA
• Sequence: 41 - ACCACAGGGUAGAACCACGGACG - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381