Stem-loop oni-mir-10573a

Accession

MI0034775

Description

Oreochromis niloticus oni-mir-10573a precursor miRNA

Sequence

aacuccauuccucgaaggccggugucaugcaacuuuuccaUGCCCUCGAGGACUGGAGUUU
(((((((.(((((((.(((.((...............))..))).))))))).))))))).

Structure

-       u       a   -c  ugucau 
 aacucca uccucga ggc  gg      g
 ||||||| ||||||| |||  ||      c
 UUGAGGU AGGAGCU CCG  cc      a
U       C       C   Ua  uuuuca 

Annotation confidence Not enough data

Genome context

AERX01077620.2: 274-334 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-10573a

Mature oni-miR-10573a

• Accession: MIMAT0042838
• Description: Oreochromis niloticus oni-miR-10573a mature miRNA
• Sequence: 41 - UGCCCUCGAGGACUGGAGUUU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381