Stem-loop oni-mir-148

Accession

MI0034764

Description

Oreochromis niloticus oni-mir-148 precursor miRNA

Sequence

AAGUUCUGUGAUACACUUAGACUcuaacugcccgcagUCAGUGCAUUACAGAACUUUG
((((((((((((.((((..(((((.........).)))))))).))))))))))))..

Structure

--            A    UA    - uaa 
  AAGUUCUGUGAU CACU  GACU c   c
  |||||||||||| ||||  |||| |   u
  UUCAAGACAUUA GUGA  CUga g   g
GU            C    --    c ccc 

Annotation confidence Not enough data

Genome context

CM001459.1: 15445884-15445941 [-]

Mature oni-miR-148-5p

• Accession: MIMAT0042823
• Description: Oreochromis niloticus oni-miR-148-5p mature miRNA
• Sequence: 1 - AAGUUCUGUGAUACACUUAGACU - 23
• Evidence: experimental ; Illumina [1-2]

Mature oni-miR-148-3p

• Accession: MIMAT0042824
• Description: Oreochromis niloticus oni-miR-148-3p mature miRNA
• Sequence: 38 - UCAGUGCAUUACAGAACUUUG - 58
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381


2. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774