Stem-loop oni-mir-24b

Accession

MI0034734

Description

Oreochromis niloticus oni-mir-24b precursor miRNA

Sequence

UGCCUACUGAACUGGUAUCAGUguuacaccugaaaacUGGCUCAGUUCAGCAGGAACag
..(((.(((((((((..(((((.............))))).))))))))).))).....

Structure

---UG   A         UA     guuac 
     CCU CUGAACUGG  UCAGU     a
     ||| |||||||||  |||||     c
     GGA GACUUGACU  GGUca     c
gaCAA   C         -C     aaagu 

Annotation confidence Not enough data

Genome context

CM001465.1: 19640768-19640826 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from oni-mir-24b

Mature oni-miR-24b-5p

• Accession: MIMAT0042788
• Description: Oreochromis niloticus oni-miR-24b-5p mature miRNA
• Sequence: 1 - UGCCUACUGAACUGGUAUCAGU - 22
• Evidence: experimental ; Illumina [1-2]

Mature oni-miR-24b-3p

• Accession: MIMAT0042789
• Description: Oreochromis niloticus oni-miR-24b-3p mature miRNA
• Sequence: 38 - UGGCUCAGUUCAGCAGGAAC - 57
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381


2. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774