Stem-loop oni-mir-140

Accession

MI0034557

Description

Oreochromis niloticus oni-mir-140 precursor miRNA

Sequence

cagugguuuuacccuaugguaggugacaucaugcuguucuACCACAGGGUAGAACCACGGAC
..(((((((((((((.((((((..((((......)))))))))).)))))))))))))....

Structure

--ca             a      gu    uc 
    gugguuuuacccu ugguag  gaca  a
    ||||||||||||| ||||||  ||||   
    CACCAAGAUGGGA ACCAuc  uugu  u
CAGG             C      --    cg 

Annotation confidence Not enough data

Genome context

CM001450.1: 4527097-4527158 [+]

Mature oni-miR-140

• Accession: MIMAT0042660
• Description: Oreochromis niloticus oni-miR-140 mature miRNA
• Sequence: 41 - ACCACAGGGUAGAACCACGGAC - 62
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381


2. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774