Stem-loop nbr-mir-135c

Accession

MI0034506

Description

Neolamprologus brichardi nbr-mir-135c precursor miRNA

Sequence

UAUGGCUUUUUAUUCCUAUGUGAugaugaaaaguguucAUGUAGGAACAGAAGCCAUUUC
.(((((((((..(((((((((((..((.....))..))))))))))).)))))))))...

Structure

--U         UA           ug  g 
   AUGGCUUUU  UUCCUAUGUGA  au a
   |||||||||  |||||||||||  || a
   UACCGAAGA  AAGGAUGUAcu  ug a
CUU         -C           ug  a 

Annotation confidence Not enough data

Genome context

JH422288.1: 7005303-7005362 [+]

Mature nbr-miR-135c-5p

• Accession: MIMAT0042629
• Description: Neolamprologus brichardi nbr-miR-135c-5p mature miRNA
• Sequence: 1 - UAUGGCUUUUUAUUCCUAUGUGA - 23
• Evidence: experimental ; Illumina [1]

Mature nbr-miR-135c-3p

• Accession: MIMAT0042630
• Description: Neolamprologus brichardi nbr-miR-135c-3p mature miRNA
• Sequence: 39 - AUGUAGGAACAGAAGCCAUUUC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381