Stem-loop nbr-let-7b-2

Accession

MI0034460

Description

Neolamprologus brichardi nbr-let-7b-2 precursor miRNA

Sequence

uuauccagccuguagggccuuuacugauguucguacggggUGAGGUAGUAGGUUGUGUGGUU
((((.(((((((....(((((.(((..(((....))).))))))))..))))))).))))..

Structure

--    c       uagg     u   ga   u 
  uuau cagccug    gccuu acu  ugu c
  |||| |||||||    ||||| |||  |||  
  GGUG GUUGGAU    UGGAG Ugg  gca g
UU    U       --GA     -   -g   u 

Annotation confidence Not enough data

Genome context

JH422276.1: 12828393-12828454 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from nbr-let-7b-2

Mature nbr-let-7b

• Accession: MIMAT0042564
• Description: Neolamprologus brichardi nbr-let-7b mature miRNA
• Sequence: 41 - UGAGGUAGUAGGUUGUGUGGUU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381