Stem-loop nbr-mir-16a

Accession

MI0034445

Description

Neolamprologus brichardi nbr-mir-16a precursor miRNA

Sequence

UAGCAGCACGUAAAUAUUGGCgugugagaauagaccccaaccccaauauuagcagugcugcuuc
.((((((((((.((((((((.((.((.(........))))).)))))))).)).))))))))..

Structure

-U        -  A        C  g  a aau 
  AGCAGCAC GU AAUAUUGG gu ug g   a
  |||||||| || |||||||| || || |    
  ucgucgug cg uuauaacc ca ac c   g
cu        a  a        c  -  - cca 

Annotation confidence Not enough data

Genome context

JH422310.1: 1071533-1071596 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from nbr-mir-16a

Mature nbr-miR-16a

• Accession: MIMAT0042578
• Description: Neolamprologus brichardi nbr-miR-16a mature miRNA
• Sequence: 1 - UAGCAGCACGUAAAUAUUGGC - 21
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381